The Affymetrix GeneChip® System GCS3000 provides the opportunity for both gene expression profiling and DNA wide analysis. It can be used for linkage analysis, association studies involving of copy number changes, LOH, etc. DNA Resequencing and sequencing of the entire mitochondrial genome are other screening options.
DNA-Analysis (10K, 100K and 500K SNP Arrays):
Linkage Analysis
Association Studies
LOH Analysis
Copy-Number changes
Gene expression Analysis:
Gene expression Arrays
size: full genome or ?custom-made?
species: human, rat, mouse, canine, bovine, C.elegans, chicken, Drosophila, E.coli, Rhesus Macaque, xenopus, yeast, zebrafish, various prokaryotes and plants
Exon-Arrays (more than 1 million exons for alternative splicing/exon usage studies)
Tiling Arrays (14 arrays covering the complete human genome with 10bp spacing between the probe sets)
Chromatin Immunoprecipitation Chip (CHIP on Chip) using Promoter arrays
DNA Methylation Studies
Resequencing:
human mitochondrial genome, microbial genomes, or customer specific DNA fragments up to 300 kb
The GeneChip® Scanner 3000 7G is a product extension of the GeneChip® Scanner 3000 series that allows next-generation higher density arrays, enabling new applications for genotyping with up to 500,000 SNPs, tiling arrays for transcription, and all-exon arrays for whole-genome analysis. The New GeneChip® Scanner 3000 7G incorporates advanced design improvements with space-saving, speed, superior performance, and lower scanner-to-scanner variation to dramatically improve throughput and efficiency in your genetic analysis. This new scanner provides improved auto-focus, more accurate gridding, and more consistent scanner-to-scanner biological performance, improving data integrity and data sharing between researchers.
The Additionally, the GeneChip Scanner 3000 7G has been designed to accommodate future advancements in GeneChip® probe array technology. Combined with the GeneChip® AutoLoader, the GeneChip Scanner 3000 7G provides sample tracking, temperature control, and walk-away freedom from scanning.
